Insertion junction: CLIP2.060068_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060068
Chromosome:chromosome 2
Location:41839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g073200 THD1 putative threonine dehydratase and component psaA trans-splicing sub complex II; (1 of 1) K01754 - threonine dehydratase (E4.3.1.19, ilvA, tdcB) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGGCCCGGGTTTGGGGCGGGTTTTGTCCGAATTCCTATGGAGAAGCC
Internal bar code:ATATGGCAGGGTCATCGGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:853
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGAATTGCACCACTTTGGCA
Suggested primer 2:CAATGATGCATGGCGGGAAG