Insertion junction: CLIP2.060076_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060076
Chromosome:chromosome 9
Location:2009883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396750 CSE18 Predicted protein of CSE family; (1 of 1) IPR000601//IPR022409 - PKD domain // PKD/Chitinase domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGTATGAAGTACAAACCCGGCAGCCGCTCAGAGCGGCCTCAGCACATT
Internal bar code:GGCGTTGTCAAGAGCCATGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2740
LEAP-Seq percent confirming:98.5916
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGCCGCATTGACATTCG
Suggested primer 2:ACCGTACTGACACCAGCTTG