Insertion junction: CLIP2.060077_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060077
Chromosome:chromosome 13
Location:1948572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576250 (1 of 1) K15202 - general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) (GTF3C5, TFC1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCTCATTCAGCATCCAGCACGTATCCTTCCAACAGTCCGTGCTTACT
Internal bar code:GGTCACTGTGATTCGTCGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:359
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGATGAGGAGGACGACG
Suggested primer 2:TCACTGACGACTCACTGTGC