Insertion junction: CLIP2.060079_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060079
Chromosome:chromosome 14
Location:2806630
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g626600 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCAGGAGATCGCCCGTCATAGGACGGAGGGTGTCAGGAGATGACGTAA
Internal bar code:GTGGCAACGGATTTCGGACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1142
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGCACAACACGCATGAC
Suggested primer 2:GATCCTGCTTGTGCTCTGGT