Insertion junction: CLIP2.060086_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060086
Chromosome:chromosome 9
Location:497453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre18.g748997 (1 of 3) PTHR11132//PTHR11132:SF64 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED 3'UTR
Cre18.g749047 (1 of 3) 2.4.1.68 - Glycoprotein 6-alpha-L-fucosyltransferase / Guanosine diphosphofucose-glycoprotein fucosyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGGTGGGTTCGAAGCGGGTGACGACTGGGCAAGCCGGCGAGTAAGAG
Internal bar code:TGTCTACCGGGTGTGTCACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1848
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCACGGTGTAGCACAGAC
Suggested primer 2:TGCCTGTACAAACCGACCTC