Insertion junction: CLIP2.060086_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060086
Chromosome:chromosome 9
Location:497459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre18.g748997 (1 of 3) PTHR11132//PTHR11132:SF64 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED 3'UTR
Cre18.g749047 (1 of 3) 2.4.1.68 - Glycoprotein 6-alpha-L-fucosyltransferase / Guanosine diphosphofucose-glycoprotein fucosyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCCCATCATGTTTGCACTTCTGGGCAAGCGGGCGAATGTCGTACTTC
Internal bar code:CTAGTGCCCAGATGAAGTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1651
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTGTACAAACCGACCTC
Suggested primer 2:TGTCACGGTGTAGCACAGAC