Insertion junction: CLIP2.060089_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060089
Chromosome:chromosome 2
Location:4031655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g103000 FKM3 DNA methylase in the FkbM family; (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAAGTTCCCAAACCGGCCAAATGCGTAGATCTCTAGTATCTGAGACG
Internal bar code:CCGTCGACACCAGCCCGTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2727
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCACTCGTCTACCTCATC
Suggested primer 2:CGCGGTACTACTCTCGAACC