Insertion junction: CLIP2.060091_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060091
Chromosome:chromosome 1
Location:5834941
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g041850 (1 of 10) PTHR12270:SF6 - GLYCOSYLTRANSFERASE-LIKE PROTEIN LARGE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGACCGTCGCCCGCACCCGCCTCCCCGCACCTCCCCCCCCCCCAACC
Internal bar code:CTGGAACGGGGGATAGTAGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:750
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTACAACCCTCCCCTCCC
Suggested primer 2:TTGTCGCCGACTTGATGACA