Insertion junction: CLIP2.060095_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060095
Chromosome:chromosome 10
Location:4017682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g447500 KIN12-3,KIN16B,KIN16-2 Kinesin motor protein; (1 of 1) K10392 - kinesin family member 1 (KIF1) 5'UTR
Cre10.g447550 (1 of 2) PF03200 - Glycosyl hydrolase family 63 C-terminal domain (Glyco_hydro_63) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGCATGAGTTATTTTAAATAATGACATTGACATGGACCAGGGCGCGG
Internal bar code:TCTCACCCCGTAAAACAGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1207
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCATGTTCATTCCGCTCG
Suggested primer 2:CACTCGTCCGGGTTATAGGC