Insertion junction: CLIP2.060098_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060098
Chromosome:chromosome 14
Location:2650233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625500 ANK10,FAP254 Ankyrin Repeat Flagellar Associated Protein 254; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACATTCAATTTGCAACGTCAAGGATGCGGATGTTACAGAGGGGACAGT
Internal bar code:GTTCCGCCGCACGAACGGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2625
LEAP-Seq percent confirming:92.7273
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATCTTGCCTGTCGCTTA
Suggested primer 2:CGTAATGCCGTGGCTCATTG