Insertion junction: CLIP2.060100_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060100
Chromosome:chromosome 16
Location:5417166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682800 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCACTTTCCGCAAGTGCTCGCTGCGGAAGACTTTTTCAGCTAGTTCAA
Internal bar code:AGCATTTTGGCTGCTTCAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1327
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAAGAGGCGACAAGGTGT
Suggested primer 2:TCACCACCTTGGCAGCTATG