Insertion junction: CLIP2.060111_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060111
Chromosome:chromosome 5
Location:1940357
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATACACATACGATGGAACCTTAATGTTCCCATGCCTTGCGCCATCTT
Internal bar code:GCAAGACTTATGGAGGCGGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3436
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTGCGTACATCGTGTGT
Suggested primer 2:ATGCGGAGGACCTTAACAGC