Insertion junction: CLIP2.060119_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060119
Chromosome:chromosome 4
Location:2051141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g219250 IFT52,BLD1 Intraflagellar transport protein 52; (1 of 1) PF09822 - ABC-type uncharacterized transport system (ABC_transp_aux) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACACGCCCGCCACCTTGCACACCCAACACAGCTCACTGTTGCAACCG
Internal bar code:TTTACTGCGCTCCTCTCTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1630
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGGGAGCCTTTATCGGA
Suggested primer 2:GGAGGGAAGTATGGCGACTG