Insertion junction: CLIP2.060121_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060121
Chromosome:chromosome 13
Location:663660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566150 RMR1 (1 of 1) 2.1.1.185 - 23S rRNA (guanosine(2251)-2'-O)-methyltransferase; Putative RNA 2'-O ribose methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCCGACCCGCTCACTCGCGAACTAAAGAACACATACCATATCCACCA
Internal bar code:AGTTAAATCGCAGTTATGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1016
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTACCGTACGTGTGCAGG
Suggested primer 2:CATCCTTAAGCCTGCGTGGA