Insertion junction: CLIP2.060125_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060125
Chromosome:chromosome 3
Location:3281043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAAAAATACCCGCCGCAGTACACAACCATCCAATGCGCGCCGCCGCC
Internal bar code:TATGATCCAAAACGGAGAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1477
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTCAAGGCTCATGACCC
Suggested primer 2:CAACCACTGAAAGCACCTGC