Insertion junction: CLIP2.060126_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060126
Chromosome:chromosome 3
Location:4875999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178400 (1 of 1) IPR002893//IPR023407 - Zinc finger, MYND-type // Ribosomal protein S27e, zinc-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAACGCCGTAAAAGGACTTGATGACAAGCCGGGCTTCCCTGTGTATGGA
Internal bar code:TACCCTGGGCCCAGGCGTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1775
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGAAGCCAATCCCAAGT
Suggested primer 2:AGCACAATCCCTACACCAGC