Insertion junction: CLIP2.060132_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060132
Chromosome:chromosome 13
Location:2386474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579250 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCACTGAAACGCAAACATGGACCATCTTCAAAAGGTTACATGATGGC
Internal bar code:TTAGAAGTCAAGTTGTTGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1955
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGAGCGTGTGTGTGTGTG
Suggested primer 2:CGAGCTAATGTTGCAGCACC