Insertion junction: CLIP2.060133_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060133
Chromosome:chromosome 5
Location:2732230
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g240533 (1 of 2) IPR002867//IPR013083//IPR031127 - IBR domain // Zinc finger, RING/FYVE/PHD-type // E3 ubiquitin ligase RBR family 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCGGCTAACTTGTTCTTACCCAACATGTGTGCACAGCCTGCTTTCCG
Internal bar code:ACGCAGCAGGGGGCGGGATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:352
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTCCCGCCTACCTTTTA
Suggested primer 2:GATGCATGTGTAGCGCTGTG