Insertion junction: CLIP2.060147_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060147
Chromosome:chromosome 3
Location:8304160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199250 CYG51 (1 of 70) 4.6.1.2 - Guanylate cyclase / Guanylyl cyclase; Adenylate/guanylate cyclase 3'UTR
Cre03.g199300 AHA1 (1 of 1) PF08327//PF09229 - Activator of Hsp90 ATPase homolog 1-like protein (AHSA1) // Activator of Hsp90 ATPase, N-terminal (Aha1_N); Activator of HSP90 ATPase homolog 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTCCGTTGGGCTCGCTGATGCAGTTCGCCAGCCTCTCACCTCGCCCC
Internal bar code:CTACGAGTATCACTTTACTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:723
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGGACACACTGTGGTGG
Suggested primer 2:GTCGTTTCCTGCTGAGACCA