Insertion junction: CLIP2.060153_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060153
Chromosome:chromosome 3
Location:8938082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204577 DNJ31 (1 of 1) IPR000104//IPR001623//IPR003072 - Antifreeze protein, type I // DnaJ domain // Orphan nuclear receptor, NOR1 type; DnaJ-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTTCAAACTCTACGCACGCCCGAAGGCTCGCTCGGCGTGCGTCTGAA
Internal bar code:GATCTTCGGTCTTACAGTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3115
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCCCTATACCCTCCCT
Suggested primer 2:CTGAGGTAAACGAGCAGGCA