Insertion junction: CLIP2.060156_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060156
Chromosome:chromosome 14
Location:4119695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g633850 (1 of 1) PF14768 - Replication protein A interacting C-terminal (RPA_interact_C) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGGTCCCCCCTGTTCGGCTCACCCGCTCCCACCGATCCCCACCGATT
Internal bar code:AATTTGCGCCGAGTGTCTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1965
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAACGTATGGGCCTAGAC
Suggested primer 2:TGATGTGAGGCGATGTGAGG