Insertion junction: CLIP2.060160_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060160
Chromosome:chromosome 12
Location:5106166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525950 (1 of 7) 2.7.11.1//2.7.11.17 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase // Calcium/calmodulin-dependent protein kinase / Microtubule-associated protein 2 kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGGCCGTTTTCTAGACATTCCTCCCGGGGGCTAATGTCTGGAGCGAGA
Internal bar code:TCTAAGCAGCGAAAGCAGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2191
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCACCTCACCCATTTCG
Suggested primer 2:TTGTCCTTGTTCTTGCCGGT