Insertion junction: CLIP2.060168_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060168
Chromosome:chromosome 10
Location:4351864
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g449901 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAAAGCCGCGCCAATTGGCATCACGTGAAGGCTATCCACCAAAACCG
Internal bar code:GATAGGGTAATGGACGCTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1410
LEAP-Seq percent confirming:3.44828
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGCGCTCGGTATTAGAC
Suggested primer 2:CGTCAACTGAGCACAGACCT