Insertion junction: CLIP2.060176_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060176
Chromosome:chromosome 6
Location:5840820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289300 (1 of 33) IPR013763 - Cyclin-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGCAGTGGCGCCCGGGACTTCAGACAACGGGCTCAAAGCCCGCCATGG
Internal bar code:ATGTTCAAAGTATAGGGCCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1175
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGATGGTCCCTGATCTC
Suggested primer 2:CTGCATGTACGCGCTTTACC