Insertion junction: CLIP2.060179_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060179
Chromosome:chromosome 11
Location:4147675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481350 (1 of 14) PF14295 - PAN domain (PAN_4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGTGATGGGTTGCCCGACCTTTGCTCTTCCTGTTCGGCACTGCCATC
Internal bar code:CGGATGGCTGATTGATTATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1945
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATTGCAAGCTAGAGTC
Suggested primer 2:GGCACACGTGATGCATCATC