Insertion junction: CLIP2.060180_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060180
Chromosome:chromosome 1
Location:6767451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048350 EBM1,CGL53 (1 of 4) K19355 - mannan endo-1,4-beta-mannosidase (MAN); conserved protein with glycosyl hydrolase family 5 domain 5'UTR
Cre01.g048400 DZIP1L,DZP1 DAZ interacting zinc finger protein 1; (1 of 1) K16470 - zinc finger protein DZIP1 (DZIP1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAAATTGACCAAAAGTTCTTCGGAACTTCTGACAGCTCACAACGCTGG
Internal bar code:ATAGCGTCAAAGCGTAGTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4380
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGCCAAAAGCCACAATG
Suggested primer 2:GAGGACTGTGAGGTTGAGCC