Insertion junction: CLIP2.060181_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060181
Chromosome:chromosome 6
Location:2873272
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g272475 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGCGTGCTCCAGATAAGCCACGCTGCCAGCCCCAAACGCCGTGACTT
Internal bar code:GATCTGGGGTGGGACTAGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:250
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGTTGTCGTCGCAGTGA
Suggested primer 2:ACATTCAGTTCAGCGAGCCA