Insertion junction: CLIP2.060183_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060183
Chromosome:chromosome 8
Location:473474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359051 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACTGCGTCACGGAAAGCGGTTGGCAGGAGCGCCGCACGGGGTGAGCC
Internal bar code:AGCAATGCGAATTCTATAACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1499
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCGACAAGCTCTCGGTA
Suggested primer 2:TTTACAGTCCGTGTCGCGAA