Insertion junction: CLIP2.060188_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060188
Chromosome:chromosome 2
Location:6447024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388500 (1 of 13) PF09273 - Rubisco LSMT substrate-binding (Rubis-subs-bind) 3'UTR
Cre09.g388550 bL21m,MRPL21 Mitochondrial ribosomal protein L21; (1 of 1) K02888 - large subunit ribosomal protein L21 (RP-L21, MRPL21, rplU) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTAACGGACCAGCCCGAGGCCTTGAGTTCATGAAGGTCCGACTCACT
Internal bar code:TGATAGTTTCTGAACAGCAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5186
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCCCTTTCGGTCTGAAT
Suggested primer 2:ACAGTCGTGTGGGCGTTATT