Insertion junction: CLIP2.060192_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060192
Chromosome:mitogenome
Location:4169
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreMt.g802339 nad5,ChrepMp03,801492 NADH dehydrogenase subunit 5; (1 of 1) K03883 - NADH-ubiquinone oxidoreductase chain 5 (ND5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGTTTGTTATCATCGTAGGTAGCTTGACCGCTTTTATGGCTGGTGTGT
Internal bar code:TCTAAAAGCGGTTCAGGGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:90
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCACCAATAGCCCAAGT
Suggested primer 2:CGCCAACATGCTATTCACCG