Insertion junction: CLIP2.060199_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060199
Chromosome:chromosome 9
Location:6387419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGCTCCCTAACCAAACACTTACGCACCAGTGGATGGTCTTTCCCACT
Internal bar code:ATCGCCGAGGTTTCTGGCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1230
LEAP-Seq percent confirming:90.566
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCCCAAAATTTTCGCGT
Suggested primer 2:CCTTTCCCAAAACTTCGGCG