Insertion junction: CLIP2.060199_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060199
Chromosome:chromosome 9
Location:6387423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATGTCACGTCTGGTGCCCTCAGTGATAGATGTTGCCTGGGAATGGCT
Internal bar code:ATCGCCGAGGTTTCTGGCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2117
LEAP-Seq percent confirming:60.7143
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTCCCAAAACTTCGGCG
Suggested primer 2:CACCCCCAAAATTTTCGCGT