Insertion junction: CLIP2.060211_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060211
Chromosome:chromosome 17
Location:3893103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727700 HEL65 (1 of 2) K16911 - ATP-dependent RNA helicase DDX21 [EC:3.6.4.13] (DDX21); DEAD box ATP-dependent RNA helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGCTTAGATCGGCTGGGTATGAGATGATACAGCTTAATAAGTGCTTG
Internal bar code:CAGCAGAGTCACGCGGACACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4181
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAACGCGTGCTCCAGTA
Suggested primer 2:CGGTCGCGACTCATACTACC