Insertion junction: CLIP2.060218_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060218
Chromosome:chromosome 5
Location:2374950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238343 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTGCAGCAGCGCCAGCGCGTGCTGCCGTAGCTAGGCGCCACCCAGCGT
Internal bar code:GTGTTTGATTATCATTCTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1902
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCACGTCAACTCCTGTAC
Suggested primer 2:ACACCATATAGGAAGCCGCG