Insertion junction: CLIP2.060219_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060219
Chromosome:chromosome 11
Location:306886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467565 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTAGGTCGCCGCTCCGGGACCAGGTCCTTGAGGCCAGGTTGCGTTGAC
Internal bar code:GGGAAAGTATCACATGGTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1903
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATCATCTATGCGGCTGTCGG
Suggested primer 2:GACACACCTAGCTGTTGCCT