Insertion junction: CLIP2.060222_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060222
Chromosome:chromosome 1
Location:2633748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015750 (1 of 2) PF07978 - NIPSNAP (NIPSNAP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGCGAAGCTGACCTAGGATCTGGGAGGAGATGAAGCAAACAGAGCG
Internal bar code:ATGATCTTTGATCCAATCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1460
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGTTTGCAGGGCTCCAG
Suggested primer 2:TCCGTCCATCTGCTCTCTGA