Insertion junction: CLIP2.060228_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060228
Chromosome:chromosome 13
Location:3219599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585450 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATGGTGATGCATTCATTTTCCCACATTGCGGGCCAGGCCGGTGCAAAA
Internal bar code:AGAATCCATGCCTTGGTTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2228
LEAP-Seq percent confirming:96.4912
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:114

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAACGACGTCGCTTCTCT
Suggested primer 2:GCAGCAAAACCCTATGAGCG