Insertion junction: CLIP2.060233_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060233
Chromosome:chromosome 3
Location:5157089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAAGTTTTCCACACGTGTGCAGCAATGACGATATGAATCGGGAAGCTG
Internal bar code:GGAGCAAGTTCGGCGGACGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1304
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAACGTCCGCACTGATGT
Suggested primer 2:GTCTCTTTGTCCCGTGTCGT