Insertion junction: CLIP2.060237_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060237
Chromosome:chromosome 12
Location:3311152
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498850 CEP12 Cysteine endopeptidase; (1 of 3) 3.4.18.1 - Cathepsin X / Lysosomal carboxypeptidase B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGGGCCATGTATCTTATTACCCTGTGCCGGCTTGACGAATACTTATC
Internal bar code:TTAACACGTATTTAATGAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:6938
LEAP-Seq percent confirming:99.422
LEAP-Seq n confirming:172
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:173

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCACCGGTGTTGTTTGC
Suggested primer 2:AAGTGATTGCTGAGTCGCGA