Insertion junction: CLIP2.060246_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060246
Chromosome:chromosome 16
Location:1505167
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653000 (1 of 1) K18404 - tudor domain-containing protein 3 (TDRD3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACGAGGGTGAGATTTGAACTCACGCCCTTTCGGACTAGTAGCTTCCG
Internal bar code:GAGTGTTTGGATATACGTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2675
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGACTACGATGATGGCG
Suggested primer 2:CGATATGTGCCGTACGGTGA