Insertion junction: CLIP2.060248_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060248
Chromosome:chromosome 12
Location:4562959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521500 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGCAACAGGGCGGCCGTCGGGGCCGGCAGTAACCGCGGGCCTTGCGG
Internal bar code:AGTATCCACAAGAGACTGCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:732
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGTGTGTTGTGCGAAGG
Suggested primer 2:AAAGAGTGGGACGAACGCAT