Insertion junction: CLIP2.060251_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060251
Chromosome:chromosome 7
Location:4495515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343600 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGTGCTATGGCTGCTGCAAGTTGTTTCGGGTTAAGGAGGAGGGTGG
Internal bar code:ACATGAACCCGCTGGCCGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3968
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCGTTCCTGCAACAAAG
Suggested primer 2:CGGGATTACAGAGCGGACTC