Insertion junction: CLIP2.060256_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060256
Chromosome:chromosome 16
Location:228754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694704 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGCGTCTTCGCAGCGGGCCGCTGCTGAGTATGCAGCTTCCACACACC
Internal bar code:TTGAGAAAGATGACGTTTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1168
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGAAGAGCCCTGGACAG
Suggested primer 2:TAATGATGGCAATGCAGCGC