Insertion junction: CLIP2.060264_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060264
Chromosome:chromosome 4
Location:1274169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214850 (1 of 1) IPR000104//IPR000253 - Antifreeze protein, type I // Forkhead-associated (FHA) domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGACCGCTCGTAACTTATGACGGACCCCAAAACGCCAACCTGGTGG
Internal bar code:TTGACGTCAGTACTTGCCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3893
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTTGATGTTGCTGCGCAA
Suggested primer 2:CCGGAATTCGAGTCTGAGGG