Insertion junction: CLIP2.060265_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060265
Chromosome:chromosome 7
Location:1442270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323550 PUS8 (1 of 2) 5.4.99.19 - 16S rRNA pseudouridine(516) synthase / 16S RNA Psi(516) synthase; RNA pseudouridine synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTAGACTCACAGACTCAACTCAACTGAAGTTGGGCAGTCTCCGAAAT
Internal bar code:GCCATTTCATTTGAGTACTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1305
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTCCTCATCATCATCGT
Suggested primer 2:ATGTCCTGTGTCGCTTTCGT