Insertion junction: CLIP2.060273_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060273
Chromosome:chromosome 17
Location:5543783
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739500 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 5'UTR
Cre17.g739550 CPLD12 Conserved in the Plant Lineage and Diatoms; (1 of 11) 2.7.4.3 - Adenylate kinase / Myokinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCTCGGGTCGGAGTGTCAGCATAATGACGTGGGCAGCGTGTGGGCT
Internal bar code:GTGGTGAAGCTTGTTTGTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4040
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCATACAGCTGTTCAACG
Suggested primer 2:TGTCAGCTTGCTAGGGAACG