Insertion junction: CLIP2.060277_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060277
Chromosome:chromosome 10
Location:2409649
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435100 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCCTGTACCCTTCGTGACCAGCCACCCATCCCACCCTCCTGTGCACC
Internal bar code:TCAAGTAAGTGCTCTGTGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1176
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGCGGTCTTGCTCGATG
Suggested primer 2:ATCTGTCTCCTGGCCATCCT