Insertion junction: CLIP2.060279_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060279
Chromosome:chromosome 6
Location:3539444
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800659 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACTTGCATCAGCTCGCCGGTATCATGGCCCAGCCGCCGCAACCTCAGT
Internal bar code:CTGGCGGGATTACGGATTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1756
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTGTATGAGCCACGTG
Suggested primer 2:TTACTGTGTCTGCCAGTGCC