Insertion junction: CLIP2.060284_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060284
Chromosome:chromosome 12
Location:5271309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527950 (1 of 1) 2.4.1.227 - Undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase / Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTGACGGTGATGCTGCCTTTGATGGTGGTGATACTGATGGTGGTAA
Internal bar code:TTTTTATAGTTATGCATTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1998
LEAP-Seq percent confirming:75.7576
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATTGCAAAGCAGTGACC
Suggested primer 2:TGACCTACAACGTTTCCCGG