Insertion junction: CLIP2.060285_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060285
Chromosome:chromosome 5
Location:1387036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234639 CCT4 T-complex protein 1, delta subunit; (1 of 1) K09496 - T-complex protein 1 subunit delta (CCT4) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTAAGAGACGCGCATCGATCTGACCTTGTCCTCTCTTTCTCTTTCGCT
Internal bar code:TGAGAAGACCAGACCATAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:811
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTACCACAACCGGAGCTT
Suggested primer 2:AAGCTCACGGATTTGGGGAG